Closed levinas closed 9 years ago
Velvet has a bug in parsing args which requires -interleaved to be specified explicitly in some cases.
This doesn't work:
velveth tmp 29 -shortPaired2 -fastq -separate R2.fq R1.fq -shortPaired -fastq int.pe.fastq
This works:
velveth tmp 29 -shortPaired2 -fastq -separate R2.fq R1.fq -shortPaired -fastq -interleaved int.pe.fastq
Solution: make -interleaved explicit
1296a9a92f0ec131b0c1a01667f9a4c9dd9a847e
Velvet has a bug in parsing args which requires -interleaved to be specified explicitly in some cases.
This doesn't work:
This works:
Solution: make -interleaved explicit