kbaseattic / assembly

An extensible framework for genome assembly.
MIT License
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Pipeline stage reporting might be inaccurate #86

Open cbun opened 10 years ago

cbun commented 10 years ago

Probably an issue with recursive env classes.

sebhtml commented 10 years ago

what is an env class ? Is it related to an environment variable ?

cbun commented 10 years ago

No, it's the environment for an s-expression in the Wasp engine:

(begin 
  (begin (setparam k 59) (kiki READS)) 
  (kiki READS)
)

Both kiki runs should have different environments

cbun commented 10 years ago

Well, to be more precise, they share the outer environment, but setparam remains in it's own inner env

sebhtml commented 10 years ago

So it is the lexical scope (or to be more precise, all the variables reachable from the lexical scope of a variable).

cbun commented 10 years ago

Correct.