This is a problem for Fastg connectivity binning because header names expected to match exactly
Script fastgFishing.pl works fine because it only checks the NODE numbers - however the output is based on the header given in the scaffolds.paths file, not scaffolds.fasta file. Check how they are hashed and report the names in the scaffolds.fasta file!
This is a problem for Fastg connectivity binning because header names expected to match exactly Script fastgFishing.pl works fine because it only checks the NODE numbers - however the output is based on the header given in the scaffolds.paths file, not scaffolds.fasta file. Check how they are hashed and report the names in the scaffolds.fasta file!