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kcleal / pywfa

Python wrapper for wavefront alignment using WFA2-lib
MIT License
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AlignmentResult.pretty prints the cigartuples to stdout #14

Open matthuska opened 8 months ago

matthuska commented 8 months ago

The property pretty is useful to get the pretty-printed version of the alignment as a string, but it currently generates noise by printing cigar tuples to stdout. Deleting the following line would resolve this issue:

https://github.com/kcleal/pywfa/blob/734c970eaee4b9a05072e8734174187548f068ba/pywfa/align.pyx#L138

kcleal commented 8 months ago

Thanks! Ive just removed it from the main branch

kcleal commented 8 months ago

Ill leave it open until the release is on pypi