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kcri-tz / sans

GNU General Public License v3.0
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Nexus files are not opened by Splitstree and pdf are not created #2

Closed matdechiara closed 4 months ago

matdechiara commented 4 months ago

Hi, I have run the command

SANS -i isolates_paths.txt -o splitfile -v -T 10

and i I get a file with 255 lines, with in each row a number and then a list of filenames.

However when I create a nexus from that (sans2nexus.py splitfile isolates_paths.txt) and I try to open it with splitstree ( 4 or 6 ) I get errors. Actrually, the v6 doesn't do anything, while the v4 give this error: "Import failed: unknown format or erro in file (e.g. illegal charachters or multiple occurrences of same taxon name)."

sans is on a linux server, Splitstree on a mac, so I installed the Splitstree also on the server, but if I use the command to create the pdf (sans2pdf.py splitfile isolates_paths.txt ) only the nexus is creted, without any error reported.

zwets commented 4 months ago

Better report this at the upstream repository. The repository you have cloned is a (modified and out of date) fork of that SANS repository.