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kdahlquist / GRNmap

Gene Regulatory Network modeling and parameter estimation
BSD 3-Clause "New" or "Revised" License
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Compute betweenness centrality using SBET toolbox #259

Closed kdahlquist closed 7 years ago

kdahlquist commented 8 years ago

I am closing #224 and opening this one because the task has changed. @khorstmann and @maggie-oneil are working on computing betweenness centrality using the SBET toolbox.

Documentation for the User Manual is here: https://promis.tamu.edu/projects/sbetoolbox/wiki/SBEToolbox_User_Manual

Please post a comment on this issue noting your progress for the week after your work session on Tuesday.

kdahlquist commented 8 years ago

@maggie-oneil mentioned something about a comment from @khorstmann, but I can't find one. @khorstmann would you please provide an update on progress on this issue?

kdahlquist commented 8 years ago

Did you guys figure out what format the adjacency matrix needed to be in?

kdahlquist commented 7 years ago

They have moved on to Gephi, so closing this one.