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kdahlquist / GRNmap

Gene Regulatory Network modeling and parameter estimation
BSD 3-Clause "New" or "Revised" License
4 stars 3 forks source link

Release v1.10 #382

Closed dondi closed 5 years ago

dondi commented 6 years ago

If possible, wrap-up release for the semester's work. Procedure can be found here: https://github.com/kdahlquist/GRNmap/wiki/How-To-Create-a-New-Release

im-deepfriedwater commented 6 years ago

I've noticed on the instructions after the first step of merging beta into master, the next step is to tag the commit for the release. But the instructions do not mention pushing the commit after merging into master. If the tests are passing, do I have the go ahead to push the merging of beta into master onto the repo?

Otherwise I am unable to tag the release to my knowledge. Any thoughts @dondi ?

im-deepfriedwater commented 6 years ago

Additionally, I was wondering what version number this would be. Our most recent on is v1.8. Are the changes sufficient to call it v2.0? I'll also defer to @kdahlquist on these matters.

kdahlquist commented 6 years ago

Need advice from @dondi on how to do the merging with forks. @jtorre39 has merged beta into master on his fork, but should he now push to the master branch on the main repository and then tag?

The confusion is that the instructions on the wiki are pre-dating the use of forks to manage the code.

im-deepfriedwater commented 6 years ago

I figured it out! The commits are tagged and the release is drafted! I'm testing the binaries I uploaded right now to make sure it was packaged properly.

im-deepfriedwater commented 6 years ago

I ran a test sheet and compared it to the results from the code on our master branch and it checks out!

kdahlquist commented 6 years ago

Let's pull the trigger on this!

im-deepfriedwater commented 6 years ago

Released!

im-deepfriedwater commented 6 years ago

Website updated!

kdahlquist commented 6 years ago

@kdahlquist will talk to @dondi to get Zenodo running for GRNmap.

kdahlquist commented 5 years ago

Updated title to this issue for the upcoming release of v1.10. @dondi and @kdahlquist will do it in the room together to troubleshoot getting Zenodo to work.

kdahlquist commented 5 years ago

So it turns out that Zenodo does have a badge for us. See: https://zenodo.org/record/1206314#.W8ZNf_lRfmg I've added it to the ReadMe at the top level of the repository. So I guess the last time I checked there was just a lag and I didn't see it yet. We can move forward with the release on Thursday. I'm going to work on the ReadMe and sample files #407 now. We'll close this issue when we do the release on Thursday.

dondi commented 5 years ago

Follow-up fixes have been done and @jtorre39 can return to working on releasing this. Keep an eye out for documents changed in master and just make sure that those changes are preserved when merging back into beta.

im-deepfriedwater commented 5 years ago

The drafted release has been updated!