search

kdkorthauer / dmrseq

R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing
MIT License
54 stars 14 forks source link

this tool could also be used in RRBS data or just WGBS? #45

Closed sixone11 closed 3 years ago

sixone11 commented 3 years ago

I have multi-groups and want to find DMRs among them. Is it appropriate to use this tool?

Thanks in advance!

kdkorthauer commented 3 years ago

Hi,

Yes, you can use dmrseq for RRBS. For more discussion on this, see this issue.

sixone11 commented 3 years ago

Thank you very much for your kind help!