search

kdm9 / axe

Rapid competitive read demulitplexer. Made with tries.
http://axe-demultiplexer.rtfd.io
GNU General Public License v3.0
23 stars 5 forks source link

Demultiplexing without read trimming #13

Open MaximilianStammnitz opened 3 years ago

MaximilianStammnitz commented 3 years ago

Hi Kevin,

Many thanks for providing Axe to the community!

I've just come across your tool and would be interested to give it a try – however for my downstream applications it'd be rather essential not to trim off the barcodes (neither R1 nor R2) upon demultiplexing. Could you possibly add this option "--no-trim"?

Best wishes, Max

kdm9 commented 3 years ago

I'm working on an implementation of this, I'll give you a branch to test later this week @MaximilianStammnitz