keichi mpEDM issues - Githubissues

keichi / mpEDM

A scalable parallel implementation of Empirical Dynamic Modeling

MIT License

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issues

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Add benchmark for measuring lookups w/o rho calc.

#90 keichi closed 1 year ago
0
Add CodeQL workflow for GitHub code scanning

#89 lgtm-com[bot] closed 1 year ago
0
Bump numpy from 1.18.2 to 1.22.0 in /scripts

#88 dependabot[bot] closed 1 year ago
1
Add a script to pre-process the data for GMN

#87 wassapon-w closed 3 years ago
3
Add a script for converting HDF5 to CSV file

#86 wassapon-w closed 3 years ago
5
Example test

#85 matq007 closed 3 years ago
1
Add pointer to the ICPADS paper

#84 keichi closed 4 years ago
0
Add Dockerfile

#83 wassapon-w closed 4 years ago
0
Rename project to mpEDM

#82 keichi closed 4 years ago
0
Fail CI if cppcheck does not pass

#81 keichi closed 4 years ago
1
Add all-to-all cross mapping test

#80 keichi closed 4 years ago
0
Measure total write IO time in single-node cross mapping benchmark

#79 keichi closed 4 years ago
1
Print max output IO time

#78 wassapon-w closed 4 years ago
0
Read multiple rows at a time to improve read performance

#77 keichi closed 4 years ago
0
Batch output file writing

#76 wassapon-w closed 4 years ago
2
Investigate MPI scalability problem

#75 keichi closed 4 years ago
1
Set thread affinity

#74 keichi closed 1 year ago
0
Add option to select HDF5 dataset

#73 keichi closed 4 years ago
1
Change binary name

#72 keichi closed 1 year ago
0
Add option to transpose the input dataset

#71 keichi closed 1 year ago
1
Add option to select the dataset in an HDF5 file

#70 keichi closed 4 years ago
0
Cross Mapping MPI: Write results into HDF5 file

#69 wassapon-w closed 4 years ago
1
Write out cross mapping results from cross_mapping_mpi_bench

#68 keichi closed 4 years ago
0
Parallelize make

#67 KoheiIchikawa closed 4 years ago
1
Improve load balancing between threads in k-NN and cross mapping

#66 keichi closed 4 years ago
2
Improve scalability of MPI master

#65 keichi closed 4 years ago
0
Fix hanging bug in MPIMaster/Worker

#64 keichi closed 4 years ago
1
Apply MPI for cross mapping

#63 wassapon-w closed 4 years ago
0
Change the interface of CrossMapping

#62 keichi closed 4 years ago
0
Write cross mapping results to file

#61 keichi closed 4 years ago
4
Add option to write out raw predictions to a file

#60 keichi closed 1 year ago
0
Add CLI options to select the number of CPUs and GPUs to use

#59 keichi closed 1 year ago
0
Redo performance measurements

#58 keichi closed 4 years ago
1
Implement distributed cross mapping using MPI

#57 keichi closed 4 years ago
0
Return predictions from Simplex::predict by value

#56 keichi closed 4 years ago
1
Update copyright year and add Kohei as an author

#55 keichi closed 4 years ago
0
Move add_compile_options to take effect for all compile commands

#54 KoheiIchikawa closed 4 years ago
2
Refactoring and cleanups

#53 keichi closed 4 years ago
2
Implement a Simplex GPU kernel for Cross Mapping

#52 wassapon-w closed 4 years ago
0
Hybrid (CPU & GPU) kernel for cross mapping

#51 wassapon-w closed 4 years ago
0
Change the interface of cross mapping function

#50 wassapon-w closed 4 years ago
1
Apply GPU kernel of kNN and Simplex in Cross Mapping

#49 wassapon-w closed 4 years ago
0
Fix the tags of TEST_CASE

#48 KoheiIchikawa closed 4 years ago
0
Benchmark cross mapping (CPU) on ABCI

#47 keichi closed 4 years ago
1
Add GPU kernel for cross mapping and simplex test

#46 wassapon-w closed 4 years ago
2
CI: build and test on macOS

#45 keichi closed 4 years ago
0
Update build instructions

#44 keichi closed 4 years ago
2
Test GPU kernels in simplex_test and cross_mapping_test

#43 keichi closed 4 years ago
0
Add more test cases for simplex and cross mapping

#42 keichi closed 4 years ago
0
Write out cross mapping results to a file

#41 keichi closed 4 years ago
0