Instrument

NIRCam (Stages 1-3)

What happened?

Stage 3 fails after starting the second .calints file. I'm processing NIRCam F444W observations made of 22 uncal segments. Stage 1 and 2 seem alright. Stage 3 works for the first file, but after starting with the second file I get an error. Couldn't figure out where the issue is.

Error traceback output

AttributeError Traceback (most recent call last) File ~/miniconda3/envs/eureka/lib/python3.9/site-packages/xarray/core/common.py:306, in AttrAccessMixin.setattr(self, name, value) 305 try: --> 306 object.setattr(self, name, value) 307 except AttributeError as e: 308 # Don't accidentally shadow custom AttributeErrors, e.g. 309 # DataArray.dims.setter

AttributeError: 'Dataset' object has no attribute 'medflux'

The above exception was the direct cause of the following exception:

AttributeError Traceback (most recent call last) Cell In[23], line 1 ----> 1 s3_spec, s3_meta = s3.reduce(eventlabel, ecf_path=ecf_path, s2_meta=s2_meta)

File ~/miniconda3/envs/eureka/lib/python3.9/site-packages/eureka/S3_data_reduction/s3_reduce.py:467, in reduce(eventlabel, ecf_path, s2_meta, input_meta) 464 saved_ref_median_frame = data.medflux 465 else: 466 # Load the original median frame --> 467 data.medflux = saved_ref_median_frame 469 # correct spectral curvature 470 if not hasattr(meta, 'curvature'): 471 # By default, don't correct curvature

File ~/miniconda3/envs/eureka/lib/python3.9/site-packages/xarray/core/common.py:312, in AttrAccessMixin.setattr(self, name, value) 310 if str(e) != f"{type(self).name!r} object has no attribute {name!r}": 311 raise --> 312 raise AttributeError( 313 f"cannot set attribute {name!r} on a {type(self).name!r} object. Use setitem style" 314 "assignment (e.g., ds['name'] = ...) instead of assigning variables." 315 ) from e

AttributeError: cannot set attribute 'medflux' on a 'Dataset' object. Use setitem styleassignment (e.g., ds['name'] = ...) instead of assigning variables.

What operating system are you using?

Mac OS Sonoma 14.1.1

What version of Python are you running?

Python 3.9.7

What Python packages do you have installed?

Name Version Build Channel

affine 2.4.0 pyhd8ed1ab_0 conda-forge alabaster 0.7.13 pyhd8ed1ab_0 conda-forge anyio 4.1.0 pyhd8ed1ab_0 conda-forge aom 3.7.1 h463b476_0 conda-forge appnope 0.1.3 pyhd8ed1ab_0 conda-forge argon2-cffi 23.1.0 pyhd8ed1ab_0 conda-forge argon2-cffi-bindings 21.2.0 py39h0f82c59_4 conda-forge arrow 1.3.0 pyhd8ed1ab_0 conda-forge arviz 0.16.1 pyhd8ed1ab_1 conda-forge asciitree 0.3.3 py_2 conda-forge asdf 3.0.1 pyhd8ed1ab_0 conda-forge asdf-astropy 0.5.0 pyhd8ed1ab_0 conda-forge asdf-coordinates-schemas 0.2.0 pyhd8ed1ab_1 conda-forge asdf-standard 1.0.3 pyhd8ed1ab_0 conda-forge asdf-transform-schemas 0.4.0 pyhd8ed1ab_0 conda-forge asdf-unit-schemas 0.1.0 pyhd8ed1ab_0 conda-forge asdf-wcs-schemas 0.1.1 pyhd8ed1ab_0 conda-forge asteval 0.9.31 pyhd8ed1ab_0 conda-forge astraeus 0.3 pypi_0 pypi astropy 6.0.0 py39h373d45f_0 conda-forge astropy-healpix 0.7 py39h4d8bf0d_2 conda-forge astropy-iers-data 0.2023.12.4.0.30.20 pyhd8ed1ab_0 conda-forge astroscrappy 1.1.0 py39h4d8bf0d_2 conda-forge asttokens 2.4.1 pyhd8ed1ab_0 conda-forge async-lru 2.0.4 pyhd8ed1ab_0 conda-forge attrs 23.1.0 pyh71513ae_1 conda-forge aws-c-auth 0.7.7 h886c30d_1 conda-forge aws-c-cal 0.6.9 hea61927_1 conda-forge aws-c-common 0.9.8 h93a5062_0 conda-forge aws-c-compression 0.2.17 hea61927_6 conda-forge aws-c-event-stream 0.3.2 h0574dc0_7 conda-forge aws-c-http 0.7.14 h90b1786_2 conda-forge aws-c-io 0.13.36 he1b4ce3_0 conda-forge aws-c-mqtt 0.9.10 h8d54690_1 conda-forge aws-c-s3 0.4.1 ha5b923c_0 conda-forge aws-c-sdkutils 0.1.12 hea61927_5 conda-forge aws-checksums 0.1.17 hea61927_5 conda-forge aws-crt-cpp 0.24.7 hba4ac3b_6 conda-forge aws-sdk-cpp 1.11.182 h31542fa_7 conda-forge babel 2.13.1 pyhd8ed1ab_0 conda-forge batman-package 2.4.9 py39h4d8bf0d_1 conda-forge bayesicfitting 3.2.0 pypi_0 pypi beautifulsoup4 4.12.2 pyha770c72_0 conda-forge bleach 6.1.0 pyhd8ed1ab_0 conda-forge blosc 1.21.5 hc338f07_0 conda-forge bokeh 2.4.3 pyhd8ed1ab_3 conda-forge bottleneck 1.3.7 py39hf4a74a7_1 conda-forge brotli 1.1.0 hb547adb_1 conda-forge brotli-bin 1.1.0 hb547adb_1 conda-forge brotli-python 1.1.0 py39hb198ff7_1 conda-forge brunsli 0.1 h9f76cd9_0 conda-forge bzip2 1.0.8 h93a5062_5 conda-forge c-ares 1.23.0 h93a5062_0 conda-forge c-blosc2 2.11.3 h8eb3132_0 conda-forge ca-certificates 2023.11.17 hf0a4a13_0 conda-forge cached-property 1.5.2 hd8ed1ab_1 conda-forge cached_property 1.5.2 pyha770c72_1 conda-forge cairo 1.18.0 hd1e100b_0 conda-forge ccdproc 2.4.1 pyhd8ed1ab_0 conda-forge celerite 0.4.2 py39h425d09f_4 conda-forge certifi 2023.11.17 pyhd8ed1ab_0 conda-forge cffi 1.16.0 py39he153c15_0 conda-forge cfitsio 4.3.0 hca87796_0 conda-forge cftime 1.6.3 pypi_0 pypi charls 2.4.2 h13dd4ca_0 conda-forge charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge click 8.1.7 unix_pyh707e725_0 conda-forge click-plugins 1.1.1 py_0 conda-forge cligj 0.7.2 pyhd8ed1ab_1 conda-forge cloudpickle 3.0.0 pyhd8ed1ab_0 conda-forge colorama 0.4.6 pyhd8ed1ab_0 conda-forge comm 0.1.4 pyhd8ed1ab_0 conda-forge contourpy 1.2.0 py39he9de807_0 conda-forge corner 2.2.2 pyhd8ed1ab_0 conda-forge coverage 7.3.2 py39h0f82c59_0 conda-forge crds 11.17.13 pypi_0 pypi cycler 0.12.1 pyhd8ed1ab_0 conda-forge cytoolz 0.12.2 py39h0f82c59_1 conda-forge dask 2023.12.0 pyhd8ed1ab_0 conda-forge dask-core 2023.12.0 pyhd8ed1ab_0 conda-forge dav1d 1.2.1 hb547adb_0 conda-forge debugpy 1.8.0 py39hb198ff7_1 conda-forge decorator 5.1.1 pyhd8ed1ab_0 conda-forge defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge distributed 2023.12.0 pyhd8ed1ab_0 conda-forge docutils 0.20.1 py39h2804cbe_3 conda-forge drizzle 1.14.4 pypi_0 pypi dynesty 2.1.2 pyhd8ed1ab_0 conda-forge emcee 3.1.4 pyhd8ed1ab_0 conda-forge entrypoints 0.4 pyhd8ed1ab_0 conda-forge eureka 0.11.dev22+g1cec564f pypi_0 pypi exceptiongroup 1.2.0 pyhd8ed1ab_0 conda-forge executing 2.0.1 pyhd8ed1ab_0 conda-forge exotic-ld 3.0.0 pypi_0 pypi expat 2.5.0 hb7217d7_1 conda-forge fasteners 0.17.3 pyhd8ed1ab_0 conda-forge filelock 3.13.1 pypi_0 pypi flake8 6.1.0 pyhd8ed1ab_0 conda-forge font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge font-ttf-inconsolata 3.000 h77eed37_0 conda-forge font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge font-ttf-ubuntu 0.83 h77eed37_1 conda-forge fontconfig 2.14.2 h82840c6_0 conda-forge fonts-conda-ecosystem 1 0 conda-forge fonts-conda-forge 1 0 conda-forge fonttools 4.46.0 py39h17cfd9d_0 conda-forge fqdn 1.5.1 pyhd8ed1ab_0 conda-forge freetype 2.12.1 hadb7bae_2 conda-forge freexl 2.0.0 hfbad9fb_0 conda-forge fsspec 2023.12.1 pyhca7485f_0 conda-forge future 0.18.3 pyhd8ed1ab_0 conda-forge george 0.4.0 py39hf8cecc8_6 conda-forge geos 3.12.1 h965bd2d_0 conda-forge geotiff 1.7.1 h71398c0_14 conda-forge gettext 0.21.1 h0186832_0 conda-forge gflags 2.2.2 hc88da5d_1004 conda-forge giflib 5.2.1 h1a8c8d9_3 conda-forge glog 0.6.0 h6da1cb0_0 conda-forge gwcs 0.20.0 pyhd8ed1ab_0 conda-forge h5netcdf 1.3.0 pyhd8ed1ab_0 conda-forge h5py 3.10.0 nompi_py39haa70198_100 conda-forge hdf4 4.2.15 h2ee6834_7 conda-forge hdf5 1.14.2 nompi_h3aba7b3_100 conda-forge icu 73.2 hc8870d7_0 conda-forge idna 3.6 pyhd8ed1ab_0 conda-forge image-registration 0.2.8.dev10+g6cc4c81 pypi_0 pypi imagecodecs 2023.9.18 py39ha02826a_2 conda-forge imageio 2.31.5 pyh8c1a49c_0 conda-forge imagesize 1.4.1 pyhd8ed1ab_0 conda-forge importlib-metadata 7.0.0 pyha770c72_0 conda-forge importlib-resources 6.1.1 pyhd8ed1ab_0 conda-forge importlib_metadata 7.0.0 hd8ed1ab_0 conda-forge importlib_resources 6.1.1 pyhd8ed1ab_0 conda-forge iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge ipykernel 6.26.0 pyh3cd1d5f_0 conda-forge ipython 8.18.1 pyh707e725_3 conda-forge ipywidgets 8.1.1 pyhd8ed1ab_0 conda-forge isoduration 20.11.0 pyhd8ed1ab_0 conda-forge jedi 0.19.1 pyhd8ed1ab_0 conda-forge jinja2 3.1.2 pyhd8ed1ab_1 conda-forge jmespath 1.0.1 pyhd8ed1ab_0 conda-forge joblib 1.3.2 pyhd8ed1ab_0 conda-forge json-c 0.17 h40ed0f5_0 conda-forge json5 0.9.14 pyhd8ed1ab_0 conda-forge jsonpointer 2.4 py39h2804cbe_3 conda-forge jsonschema 4.20.0 pyhd8ed1ab_0 conda-forge jsonschema-specifications 2023.11.2 pyhd8ed1ab_0 conda-forge jsonschema-with-format-nongpl 4.20.0 pyhd8ed1ab_0 conda-forge jupyter 1.0.0 pyhd8ed1ab_10 conda-forge jupyter-lsp 2.2.1 pyhd8ed1ab_0 conda-forge jupyter_client 8.6.0 pyhd8ed1ab_0 conda-forge jupyter_console 6.6.3 pyhd8ed1ab_0 conda-forge jupyter_core 5.5.0 py39h2804cbe_0 conda-forge jupyter_events 0.9.0 pyhd8ed1ab_0 conda-forge jupyter_server 2.12.1 pyhd8ed1ab_0 conda-forge jupyter_server_terminals 0.4.4 pyhd8ed1ab_1 conda-forge jupyterlab 4.0.9 pyhd8ed1ab_0 conda-forge jupyterlab_pygments 0.3.0 pyhd8ed1ab_0 conda-forge jupyterlab_server 2.25.2 pyhd8ed1ab_0 conda-forge jupyterlab_widgets 3.0.9 pyhd8ed1ab_0 conda-forge jwst 1.11.4 pypi_0 pypi jxrlib 1.1 h27ca646_2 conda-forge kealib 1.5.2 h47b5e36_1 conda-forge kiwisolver 1.4.5 py39hbd775c9_1 conda-forge krb5 1.21.2 h92f50d5_0 conda-forge lazy_loader 0.3 pyhd8ed1ab_0 conda-forge lcms2 2.16 ha0e7c42_0 conda-forge lerc 4.0.0 h9a09cb3_0 conda-forge libabseil 20230802.1 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libevent 2.1.12 h2757513_1 conda-forge libexpat 2.5.0 hb7217d7_1 conda-forge libffi 3.4.2 h3422bc3_5 conda-forge libgdal 3.7.3 h27415a3_7 conda-forge libgfortran 5.0.0 13_2_0_hd922786_1 conda-forge libgfortran5 13.2.0 hf226fd6_1 conda-forge libglib 2.78.2 hb438215_0 conda-forge libgoogle-cloud 2.12.0 hfb399a7_4 conda-forge libgrpc 1.59.3 hbcf6334_0 conda-forge libiconv 1.17 he4db4b2_0 conda-forge libjpeg-turbo 3.0.0 hb547adb_1 conda-forge libkml 1.3.0 h1eb4d9f_1018 conda-forge liblapack 3.9.0 20_osxarm64_openblas conda-forge libllvm15 15.0.7 h504e6bf_3 conda-forge libnetcdf 4.9.2 nompi_hb2fb864_112 conda-forge libnghttp2 1.58.0 ha4dd798_0 conda-forge libopenblas 0.3.25 openmp_h6c19121_0 conda-forge libparquet 14.0.1 heaab74a_4_cpu conda-forge libpng 1.6.39 h76d750c_0 conda-forge libpq 16.1 hd435d45_0 conda-forge libprotobuf 4.24.4 hc9861d8_0 conda-forge libre2-11 2023.06.02 h1753957_0 conda-forge librttopo 1.1.0 hc8f776e_15 conda-forge libsodium 1.0.18 h27ca646_1 conda-forge libspatialite 5.1.0 h66af7d6_2 conda-forge libsqlite 3.44.2 h091b4b1_0 conda-forge libssh2 1.11.0 h7a5bd25_0 conda-forge libthrift 0.19.0 h026a170_1 conda-forge libtiff 4.6.0 ha8a6c65_2 conda-forge libutf8proc 2.8.0 h1a8c8d9_0 conda-forge libwebp-base 1.3.2 hb547adb_0 conda-forge libxcb 1.15 hf346824_0 conda-forge libxml2 2.11.6 h0d0cfa8_0 conda-forge libzip 1.10.1 ha0bc3c6_3 conda-forge libzlib 1.2.13 h53f4e23_5 conda-forge libzopfli 1.0.3 h9f76cd9_0 conda-forge llvm-openmp 17.0.6 hcd81f8e_0 conda-forge lmfit 1.2.2 pyhd8ed1ab_1 conda-forge locket 1.0.0 pyhd8ed1ab_0 conda-forge lz4 4.3.2 py39h0d94542_1 conda-forge lz4-c 1.9.4 hb7217d7_0 conda-forge lzo 2.10 h642e427_1000 conda-forge markdown-it-py 3.0.0 pypi_0 pypi markupsafe 2.1.3 py39h0f82c59_1 conda-forge matplotlib 3.8.2 py39hdf13c20_0 conda-forge matplotlib-base 3.8.2 py39h1a09f3e_0 conda-forge matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge mccabe 0.7.0 pyhd8ed1ab_0 conda-forge mdit-py-plugins 0.4.0 pypi_0 pypi mdurl 0.1.2 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orc 1.9.2 h7c018df_0 conda-forge overrides 7.4.0 pyhd8ed1ab_0 conda-forge packaging 23.2 pyhd8ed1ab_0 conda-forge pandas 2.1.3 py39hf8cecc8_0 conda-forge pandoc 3.1.3 hce30654_0 conda-forge pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge parsley 1.3 pypi_0 pypi parso 0.8.3 pyhd8ed1ab_0 conda-forge partd 1.4.1 pyhd8ed1ab_0 conda-forge pcre2 10.42 h26f9a81_0 conda-forge pexpect 4.8.0 pyh1a96a4e_2 conda-forge photutils 1.10.0 py39h373d45f_1 conda-forge pickleshare 0.7.5 py_1003 conda-forge pillow 10.1.0 py39h755f0b7_0 conda-forge pip 23.3.1 pyhd8ed1ab_0 conda-forge pixman 0.42.2 h13dd4ca_0 conda-forge pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge platformdirs 4.1.0 pyhd8ed1ab_0 conda-forge pluggy 1.3.0 pyhd8ed1ab_0 conda-forge poppler 23.11.0 hcdd998b_0 conda-forge poppler-data 0.4.12 hd8ed1ab_0 conda-forge poppy 1.1.1 pypi_0 pypi postgresql 16.1 hc6ab77f_0 conda-forge proj 9.3.0 h52fb9d0_2 conda-forge prometheus_client 0.19.0 pyhd8ed1ab_0 conda-forge prompt-toolkit 3.0.41 pyha770c72_0 conda-forge prompt_toolkit 3.0.41 hd8ed1ab_0 conda-forge psutil 5.9.5 py39h0f82c59_1 conda-forge pthread-stubs 0.4 h27ca646_1001 conda-forge ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge pyarrow 14.0.1 py39h5c469ea_4_cpu conda-forge pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge pycodestyle 2.11.1 pyhd8ed1ab_0 conda-forge pycparser 2.21 pyhd8ed1ab_0 conda-forge pyerfa 2.0.1.1 py39h373d45f_0 conda-forge pyflakes 3.1.0 pyhd8ed1ab_0 conda-forge pygments 2.17.2 pyhd8ed1ab_0 conda-forge pyobjc-core 10.0 py39h4d1a642_0 conda-forge pyobjc-framework-cocoa 10.0 py39h4d1a642_1 conda-forge pyparsing 3.1.1 pyhd8ed1ab_0 conda-forge pysocks 1.7.1 pyha2e5f31_6 conda-forge pysynphot 2.0.0 pypi_0 pypi pytest 7.4.3 pyhd8ed1ab_0 conda-forge pytest-cov 4.1.0 pyhd8ed1ab_0 conda-forge pytest-doctestplus 1.0.0 pyhd8ed1ab_0 conda-forge python 3.9.7 hc0da0df_3_cpython conda-forge python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge python-fastjsonschema 2.19.0 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kevin218 / Eureka

NIRCam Stage 3 AttributeError: cannot set attribute 'medflux' on a 'Dataset' object. #610