Deprecated pointSize, labSize args in vignette?

[cgpu]

Hi Kevin,

Thank you for this R package!

I am running the vignette and I got the following error message:

Error in EnhancedVolcano(res2, lab = rownames(res2), x = "log2FoldChange",  : 
  unused arguments (pointSize = 4, labSize = 3)

Once I remove the arguments pointSize, labSize from the EnhancedVolcano::EnhancedVolcano() function everything works ok.

https://github.com/kevinblighe/EnhancedVolcano/blob/master/vignettes/EnhancedVolcano.Rmd#L152-L153

EDIT:

Also occurs for the following args:

• [ ] boxedLabels
• [ ] labCol
• [ ] labFace

[kevinblighe]

Hey, thanks for using this package. Can you confirm the version that you are using?

The vignette will always reflect the most updated version (v1.4). In the most recent release, I made some changes to parameter names, but they should be backward compatible. It seems that you may be using a version pre- version 1.2?

[cgpu]

Hey, thanks for using this package. Can you confirm the version that you are using?

The vignette will always reflect the most updated version (v1.4). In the most recent release, I made some changes to parameter names, but they should be backward compatible. It seems that you may be using a version pre- version 1.2?

Thanks for such a prompt response - my sessionInfo() says I have 1.2

I will update this and let you know - thanks for the heads up.

[kevinblighe]

Great - thank you! You may need to update your R, too, if you want to avail of the later versions.

[cresbioinfo]

Dear Kevin, I tried installing the package using Biocmanager and it's not getting updated to the recent version. Everytime I try to download it, only the v1.2.0 is getting installed

[kevinblighe]

You are likely using an old version of R. Please update R.