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kevinblighe / scDataviz

scDataviz: single cell dataviz and downstream analyses
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I couldn't find where the full workflow for Seurat-to-scDataviz, please let me know, Thanks! Fan #15

Closed fzhang988 closed 3 years ago

fzhang988 commented 3 years ago

For a full workflow for Seurat-to-scDataviz, see the GitHub vignette.

kevinblighe commented 3 years ago

My apologies for the confusion. This is a new package. There is no lengthy workflow for Seurat-to-scDataviz. You simply have to use the as.SingleCellExperiment() command to convert your Seurat object to an object that can be used with scDataviz.