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kevlar-dev / kevlar

Reference-free variant discovery in large eukaryotic genomes
https://kevlar.readthedocs.io
MIT License
41 stars 9 forks source link

Clean up `get_abundances` function #330

Closed standage closed 5 years ago

standage commented 5 years ago

The current get_abundances function is not implemented clearly, nor does it make the intent clear.

https://github.com/dib-lab/kevlar/blob/0be4d62a2681db0e02823338bf8e363559a23c22/kevlar/simlike.py#L22-L55