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kevlar-dev / kevlar

Reference-free variant discovery in large eukaryotic genomes
https://kevlar.readthedocs.io
MIT License
40 stars 9 forks source link

Command or script for inspecting ambiguous calls #364

Open standage opened 5 years ago

standage commented 5 years ago

It should be fairly straightforward to scan a final callset, identify any cases where multiple PASSing calls are derived from the same contig, and produce pileup images to facilitate manual inspection of each case.