kevlar-dev / kevlar

Reference-free variant discovery in large eukaryotic genomes
https://kevlar.readthedocs.io
MIT License
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Dead links to tutorial files #370

Closed serosko closed 4 years ago

serosko commented 4 years ago

All links pointing to the files hosted at Amazon Web Services that are required for the quick-start or mark I tutorial are dead. The following error message is displayed when following them: `

NoSuchBucket The specified bucket does not exist noble-trios 50778E4182FFD860 f52Ljka1QOb0XYGKVYce2CqXtXjqXhOYuOT2osWZ/BCGgSJQZu502F5QJvVFGETq8VxeteMPQcQ=

`

standage commented 4 years ago

Links to mock data in the quick start and the tutorial have been updated to osf.io links (details in #327). Please check https://kevlar.readthedocs.io and confirm these links work for you.

serosko commented 4 years ago

The links are fine now. Small bug left: There is a missing pipe in the download command for the helium-config: curl -L https://osf.io/86adm/download sed "s:/home/user/Desktop:$(pwd):g" > helium-config.json should be curl -L https://osf.io/86adm/download | sed "s:/home/user/Desktop:$(pwd):g" > helium-config.json

standage commented 4 years ago

Good catch. Fixed in ebabd629e116cc08daf12ecdd1973c4a5d610538.