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kevlar-dev / kevlar

Reference-free variant discovery in large eukaryotic genomes
https://kevlar.readthedocs.io
MIT License
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Update exception handling #373

Closed standage closed 4 years ago

standage commented 4 years ago

This update fixes exception handling in the test suite. See https://github.com/pytest-dev/pytest/issues/6260. The previously offending tests didn't fail with pytest 5.3.0 (released just days ago) due to a change in the exceptions' string representation. Now the tests are implemented correctly and should pass for pytest >= 5.0.

codecov-io commented 4 years ago

Codecov Report

Merging #373 into master will decrease coverage by <.01%. The diff coverage is n/a.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #373      +/-   ##
==========================================
- Coverage   96.85%   96.85%   -<.01%     
==========================================
  Files          48       48              
  Lines        2924     2923       -1     
  Branches      543      543              
==========================================
- Hits         2832     2831       -1     
  Misses         58       58              
  Partials       34       34
Impacted Files Coverage Δ
kevlar/call.py 97.14% <ø> (-0.03%) :arrow_down:

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