kexinhuang12345 / DeepPurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
https://doi.org/10.1093/bioinformatics/btaa1005
BSD 3-Clause "New" or "Revised" License
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The meaning of the score in the document 'toy_data/ppi.txt' #174

Open ke-ning opened 6 months ago

ke-ning commented 6 months ago

Thank the authors for the excellent work. I would like to ask, when training a PPI model and importing the 'ppi.txt' file from the 'toy_data' folder, each line in this file contains a score. If I want to use my own dataset to replace this ppi.txt file, how can I obtain scores for my pairs of amino acid sequences? Or could I directly import pairs of amino acids without the score for model training? Thank you. ![Uploading 2024-03-20 18.39.03.png…]()