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kfuku52 / amalgkit

RNA-seq data amalgamation for a large-scale evolutionary transcriptomics
BSD 3-Clause "New" or "Revised" License
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consistent colors between curate and csca #43

Closed kfuku52 closed 11 months ago

kfuku52 commented 3 years ago

Tissue colors do not match between curate and csca pdf files.

Hego-CCTB commented 3 years ago

It looks like they aren't consistent within csca either. multisp_tsne.pdf shares the coloring with curate, but the rest of the output doesn't. I'll try to make tissue coloring dependent on order of input for both.

kfuku52 commented 3 years ago

This would be an easy fix. You can use sort() in the function that annotates tissue/bioproject/species colors.

Hego-CCTB commented 2 years ago

maybe add coloration info into metadata table. TODO

kfuku52 commented 1 year ago

@Hego-CCTB I will take care of it if you don't have time.

kfuku52 commented 11 months ago

This should have been solved as long as the number of the curate_group categories does not differ between curate and csca.