Foreground branch combinations mixed for multiple traits with --fg_format 2

kfuku52 / csubst

Molecular convergence detection

BSD 3-Clause "New" or "Revised" License

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Closed kfuku52 closed 8 months ago

kfuku52 commented 8 months ago

CSUBST correctly sorts out multiple traits separately to generate branch combinations at K = 2, but it is mixed up at K = 3 and higher.

kfuku52 commented 8 months ago

Additionally, the number of per-trait branch combinations should be reported separately at K > 2.

Current stdout:

Number of target branches for Electricity_generation: 88
Number of target branches for Oviparous: 88
Number of target branches for Placental: 88