kgori
commented
5 years ago Hi Shicheng,
Windows is new territory for me, so we'll have to learn as we go. Can you check that you have Rtools installed?
Kevin
Closed Shicheng-Guo closed 5 years ago
kgori
commented
5 years ago Hi Shicheng,
Windows is new territory for me, so we'll have to learn as we go. Can you check that you have Rtools installed?
Kevin
devtools::install_github("kgori/sigfit", args = "--preclean", build_vignettes = TRUE)
Downloading GitHub repo kgori/sigfit@master Error: Could not find tools necessary to compile a package In addition: Warning messages: 1: In untar2(tarfile, files, list, exdir) : skipping pax global extended headers 2: In untar2(tarfile, files, list, exdir) : skipping pax global extended headers
Matrix products: default
locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C LC_TIME=English_United States.1252
attached base packages: [1] grid stats graphics grDevices utils datasets methods base
other attached packages: [1] phytools_0.6-60 maps_3.3.0 usethis_1.5.0 devtools_2.0.2 VennDiagram_1.6.20 futile.logger_1.4.3 [7] gplots_3.0.1.1 seqinr_3.4-5 phangorn_2.5.3 ape_5.3 DOSE_3.8.2
loaded via a namespace (and not attached): [1] nlme_3.1-137 bitops_1.0-6 fs_1.2.7 bit64_0.9-7 rprojroot_1.3-2
[6] numDeriv_2016.8-1 tools_3.5.2 backports_1.1.4 R6_2.4.0 KernSmooth_2.23-15
[11] DBI_1.0.0 lazyeval_0.2.2 BiocGenerics_0.28.0 colorspace_1.4-1 ade4_1.7-13
[16] withr_2.1.2 mnormt_1.5-5 tidyselect_0.2.5 gridExtra_2.3 prettyunits_1.0.2
[21] processx_3.3.0 curl_3.3 bit_1.1-14 compiler_3.5.2 cli_1.1.0
[26] Biobase_2.42.0 formatR_1.6 animation_2.6 expm_0.999-4 desc_1.2.0
[31] caTools_1.17.1.2 scales_1.0.0 quadprog_1.5-5 callr_3.2.0 stringr_1.4.0
[36] digest_0.6.18 pkgconfig_2.0.2 sessioninfo_1.1.1 plotrix_3.7-5 rlang_0.3.4
[41] rstudioapi_0.10 RSQLite_2.1.1 combinat_0.0-8 BiocParallel_1.16.6 gtools_3.8.1
[46] GOSemSim_2.8.0 dplyr_0.8.0.1 magrittr_1.5 GO.db_3.7.0 Matrix_1.2-17
[51] Rcpp_1.0.1 munsell_0.5.0 S4Vectors_0.20.1 scatterplot3d_0.3-41 stringi_1.4.3
[56] yaml_2.2.0 clusterGeneration_1.3.4 MASS_7.3-51.3 pkgbuild_1.0.3 plyr_1.8.4
[61] qvalue_2.14.1 blob_1.1.1 parallel_3.5.2 gdata_2.18.0 DO.db_2.9
[66] crayon_1.3.4 lattice_0.20-38 splines_3.5.2 ps_1.3.0 pillar_1.3.1
[71] fgsea_1.8.0 igraph_1.2.4.1 reshape2_1.4.3 stats4_3.5.2 pkgload_1.0.2
[76] futile.options_1.0.1 fastmatch_1.1-0 glue_1.3.1 lambda.r_1.2.3 data.table_1.12.2
[81] remotes_2.0.4 BiocManager_1.30.4 gtable_0.3.0 purrr_0.3.2 assertthat_0.2.1
[86] ggplot2_3.1.1 coda_0.19-2 tibble_2.1.1 AnnotationDbi_1.44.0 memoise_1.1.0
[91] IRanges_2.16.0