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khanlab
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SPIMprep
A Snakemake workflow for pre-processing single plane illumination microscopy (SPIM, aka lightsheet microscopy)
MIT License
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Fix: Dimension separator fix, other refactoring
#3
Closed
akhanf
closed
6 months ago
akhanf
commented
6 months ago
use dimension separator of / for zarr (makes ome-zarr vieweable now!)
output single zarr with channels combined
put nifti resampled in derivatives