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khanlab / prepdwi

BIDS-app for pre-processing DWI (denoise, unring, top-up, eddy, bedpost.. )
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Fix custommask #16

Closed akhanf closed 5 years ago

akhanf commented 5 years ago

Enables use of custom brainmask (from beast or fmriprep) to mask DWI at the regT1 and grad_unwarp stage, assumes brainmask is from a grad-corrected T1w image..