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khanlab / scattr

BIDS app for structural connectivity between targeted regions
https://scattr.readthedocs.io/en/stable/
MIT License
4 stars 3 forks source link

Don't warn about missing DWIs if --dwi_dir is given #84

Closed tkkuehn closed 1 year ago

tkkuehn commented 1 year ago

The problem

If --dwi_dir is passed on the command line, we don't expect to find any DWIs in the bids_dir. We still warn though, so it would be nice to suppress that warning somehow. https://github.com/akhanf/snakebids/issues/293 will help with this.

kaitj commented 1 year ago

Just to add a note (and may be better for a separate issue), but we should update to be able to handle different naming schemes (re: see changes for to handle snakedwi).