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khanlab / snakebids

Snakemake + BIDS
https://snakebids.readthedocs.io
MIT License
17 stars 14 forks source link

Add hook to update and read argv before parsing #417

Closed pvandyken closed 4 months ago

pvandyken commented 4 months ago

None of our current plugins use it, but this will be helpful for apps that need to do extra processing on their CLI arguments beyond what can be handled by the bidsapp architecture.

codecov[bot] commented 4 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 94.50%. Comparing base (f9c43db) to head (19737c0). Report is 2 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #417 +/- ## ========================================== + Coverage 94.49% 94.50% +0.01% ========================================== Files 55 55 Lines 2180 2184 +4 ========================================== + Hits 2060 2064 +4 Misses 120 120 ```

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