kharchenkolab / Baysor

Bayesian Segmentation of Spatial Transcriptomics Data
MIT License
142 stars 29 forks source link

--prior-segmentation-confidence=1 but contradict to prior_segmentation #117

Open SanoKyohei opened 3 months ago

SanoKyohei commented 3 months ago

・Command baysor run input.csv :cell_name -m 30 --prior-segmentation-confidence=1 --plot ・Environment: Baysor v0.6.2 (in docker)

→This should not change gene assignment, however it changed a lot. In "segmentation.csv" file, "prior_segmentation" and "cell" doens`t match at all.

Could you give me a solution for this?