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kharchenkolab / Baysor

Bayesian Segmentation of Spatial Transcriptomics Data
https://kharchenkolab.github.io/Baysor/
MIT License
152 stars 31 forks source link

Fix issue loading prior segmentation from csv column. #72

Closed dcjones closed 1 year ago

dcjones commented 1 year ago

I ran into a couple issues trying to run Baysor on some Xenium using the segmentation from 10x's software as prior segmentation in Baysor, which I've fixed here.

First was assigning a number to a String field, and second was load_prior_segmentation! not returning what it was assumed to return.

VPetukhov commented 1 year ago

Thank you for the fix @dcjones , I'll look into that!

VPetukhov commented 1 year ago

Thank you for the contribution!