'sva' dependency is not available when installing from CRAN

kharchenkolab / scITD

Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition

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Closed VPetukhov closed 1 year ago

VPetukhov commented 1 year ago

Installation with install.packages('scITD') fails with ERROR: dependency ‘sva’ is not available for package ‘scITD’. R version 4.2.3.

Running BiocManager::install("sva") solves the problem. Perhaps, we should add it to the README.

j-mitchel commented 1 year ago

Just updated the readme to include this and other bioconductor based dependencies, thanks!