khyox / recentrifuge

Recentrifuge: robust comparative analysis and contamination removal for metagenomics
http://www.recentrifuge.org
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Enhancement: provide control samples in a different directory #42

Open khyox opened 2 years ago

khyox commented 2 years ago

Suggested in #37 as possible enhancement when the dataset may contain a significative number of negative control samples. When a metagenomic/metatranscriptomic study has many controls, it may be a good idea to have them organized in a different directory, separated from the regular samples, so that you don't need to rename all of them to be able to use the -c option with the number of control samples.