:wrench: update a number of tools and the workflow to handle single end samples

kids-first / kf-rnaseq-workflow

:microscope: RNA-Seq workflow for Kids-First DRC

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:wrench: update a number of tools and the workflow to handle single end samples #14

Closed bmennis closed 4 years ago

bmennis commented 4 years ago

I updated some of the tools and the RNAseq workflow to handle single end reads. I did this on a use case basis for the PBTA Splice project in which I was able to get the workflow to run on a few single end read samples.

Let me know if any additional information is needed.

migbro commented 4 years ago

Nice work @bmennis ! Going to close this since Dan is touching it it up a bit on another PR, so this one is not needed.