Ops ran into some errant outputs from annoFuse, as the column from arriba v2.2.1 containing the fusion name is in a different position than it was in v1.1.0.
Changed default column from 24 to 30
Updated default reference file for standalone annoFuse workflow
[x] Bug fix (non-breaking change which fixes an issue)
[ ] New feature (non-breaking change which adds functionality)
[ ] Breaking change (fix or feature that would cause existing functionality to not work as expected)
[ ] This change requires a documentation update
How Has This Been Tested?
Please describe the tests that you ran to verify your changes. Provide instructions so we can reproduce. Please also list any relevant details for your test configuration
Description
Ops ran into some errant outputs from annoFuse, as the column from arriba v2.2.1 containing the fusion name is in a different position than it was in v1.1.0.
24
to30
Fixes # https://github.com/d3b-center/bixu-tracker/issues/1737
Type of change
Please delete options that are not relevant.
How Has This Been Tested?
Please describe the tests that you ran to verify your changes. Provide instructions so we can reproduce. Please also list any relevant details for your test configuration
NA
for annotation, new result from task https://cavatica.sbgenomics.com/u/kids-first-drc/kids-first-drc-rnaseq-workflow/tasks/f2d5fbae-97cf-4ecd-8d85-06c6cedacf1d/# look correct.Test Configuration:
Checklist: