Library bulk download - Port 80 is Blocked

kingsfordgroup / sailfish

Rapid Mapping-based Isoform Quantification from RNA-Seq Reads

http://www.cs.cmu.edu/~ckingsf/software/sailfish

GNU General Public License v3.0

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Library bulk download - Port 80 is Blocked #70

Closed carlitre closed 9 years ago

carlitre commented 9 years ago

Hello Sailfish team,

I am installing Salmon, and in the "make" step the attempts to access port 80 are unsuccessful since that port is blocked in my University's computing center. I'd like to know if there is a repository to bulk download all the libraries (I tried http://www.cs.stonybrook.edu/~rp/files from Firefox but the site is not available). If I can bulk download them all, should I store them at /sailfish-0.2.2/external/ and then run make? Thank you.

Carlos

rob-p commented 9 years ago

Hi @carlitre,

There are new locations for downloading the dependencies that, hopefully, are not blocked for you (e.g. most dependencies are pulled directly from GitHub). Please let us know if you're still having this problem with the newest version of the software.

--Rob