search

kipoi / kipoi-veff

Variant effect prediction plugin for Kipoi
https://kipoi.org/veff-docs
MIT License
6 stars 5 forks source link

allow `stdout` filename on score_variants #8

Open Avsecz opened 6 years ago

Avsecz commented 6 years ago

Have score_variants to print the output vcf to stdout instead of the file.

Start from this branch -https://github.com/kipoi/kipoi/tree/stdout- which removes the stdout of all the other commands (logging, tqdm etc).