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kipoi / models

Model zoo for genomics
http://kipoi.org
MIT License
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First attempt at adding TREDNet model #330

Closed okurman closed 2 years ago

okurman commented 2 years ago

Hi, I would like to add the DL models of our recent paper to the Kipoi database. Hope all goes through well. Please feel free to reach out to me if I've got anything wrong. The models passed all the tests described in Getting Started page.

okurman commented 2 years ago

@haimasree I pushed a fix with the corrections. Hope it works this time.

haimasree commented 2 years ago

@haimasree I pushed a fix with the corrections. Hope it works this time.

Excellent. Thanks for the quick turnaround. The tests are passing too. I will merge it shortly. I will add the test prediction files later today and the containers will be available later as well.

haimasree commented 2 years ago

I have a quick question - do you have a preferred python (and pip) version?

okurman commented 2 years ago

Thank you! No, actually any python version should work, let alone the pip. The model itself was trained using python2.7 but I've tested it extensively in python 3 and it should work there too.