The first set of errors with KipoiSplice originated from the problem with attrs as specified here. KipoiSplice uses an older version of kipoi so it will not benefit from the new version release. I thought manually pinning attrs in dataloader.yaml would be enough but circleci does not seem to like this. Installation of the conda environments got stuck at random places in 3 trials. It could be temporary or it could be due to the fact that kipoisplice uses python 3.5 and as a result older versions of packages. I am adding a workaround by adding an empty test_subset.txt. In that way KipoiSplice will not be tested as part of ci but there are docker and singularity containers available. I will shortly add an issue.
The first set of errors with KipoiSplice originated from the problem with attrs as specified here. KipoiSplice uses an older version of kipoi so it will not benefit from the new version release. I thought manually pinning attrs in dataloader.yaml would be enough but circleci does not seem to like this. Installation of the conda environments got stuck at random places in 3 trials. It could be temporary or it could be due to the fact that kipoisplice uses python 3.5 and as a result older versions of packages. I am adding a workaround by adding an empty test_subset.txt. In that way KipoiSplice will not be tested as part of ci but there are docker and singularity containers available. I will shortly add an issue.