[ ] change the naming schema to: DeepBind/<Species>/<Type>/<ID>_<Experiment>_<Protein>
[ ] add the metadata information to the description
# The index has the following fields:
#
# ID: A unique id of the form 01234.567 that identifies a model
# 01234 is unique for each combination of (Protein, Species), and 567 is unique
# for each combination of (Experiment, Experiment Details, Model ID),
# In other words, 01234 identifies the protein 'version', whereas 567 identifies
# the model 'version' for that protein version.
# Protein: The protein name, e.g. RBFOX1.
# Type: Indicates whether the protein is considered an RBP, a TF, etc.
# Species: The species name, e.g. Homo sapiens.
# Family: The protein family, e.g. Homeodomain.
# Class: The protein structural class, e.g. Zinc-coordinating.
# Experiment: The technology used to measure the training data, e.g. ChIP-seq, HT-SELEX.
# Experiment Details: A list of strings that describe how the experiment was configured,
# e.g. ["Cell Line=K562","Lab=Stanford"]
# Model ID: A number/string that can be used to identify this model as distinct from
# other models for the same (Protein, Species, Experiment, Experiment Details),
# e.g. if a new, better model was trained and therefore needs a new version ID.
# Comments:
#
#
ID Protein Type Species Family Class Experiment Experiment Details Model Cite Labels Path Comment
D00001.001 Cebpb TF Mus musculus bZIP PBM ['DREAM5ID=C_1', 'Array=HK'] deepbind 0.1 PMID 23354101 E:/Results/deepbind/dream5/final/C_1
D00002.001 Egr2 TF Mus musculus C2H2 ZF PBM ['DREAM5ID=C_2', 'Array=HK'] deepbind 0.1 PMID 23354101 E:/Results/deepbind/dream5/final/C_2
D00003.001 Esr1 TF Mus musculus Nuclear receptor PBM ['DREAM5ID=C_3', 'Array=HK'] deepbind 0.1 PMID 23354101 E:/Results/deepbind/dream5/final/C_3
DeepBind/<Species>/<Type>/<ID>_<Experiment>_<Protein>