feat!: outlier removal - Githubissues

kircherlab / MPRAsnakeflow

new implementation of MPRAsnakeflow fork of MPRAflow

MIT License

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Closed visze closed 3 weeks ago

visze commented 3 weeks ago

Adding two options of outlier removal:

via mad: For each quantile-based bin (default 20) on rna counts remove values that are 5 times the MAD away from thethe difference between the ratio and its median (oligo wise)
via zscore (3 times absolute zscore from rna counts)