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kishwarshafin
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helen
H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
MIT License
68
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9
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helen polish UserWarning on batch size
#37
lloydlowUOA
opened
2 years ago
0
there are no other mammal models other than human?
#36
xdkong
closed
2 years ago
2
Question about model's training data
#35
huangnengCSU
closed
3 years ago
2
Only Polish interested sequences
#34
Yechao94
closed
3 years ago
3
wrong script in example Usage in README.md
#33
li081766
closed
3 years ago
1
Exception: process 6 terminated with signal SIGKILL
#32
utrivedi
closed
3 years ago
5
How to train a new model with in lab testing data
#31
yipukangda
closed
3 years ago
2
torch.set_num_threads error in docker image
#30
jmkidd
closed
3 years ago
3
MarginPolish output zero .fa file
#29
yangxiaofeill
closed
3 years ago
9
How to install helen in a gcc4.8 enrivments?
#28
biozhangzhou
closed
4 years ago
3
marginpolish docker stuck at 99%
#27
MichelMoser
closed
3 years ago
13
Are existing models suitable to polish a high heterozygosity plant genome assemblies?
#26
xiekunwhy
closed
4 years ago
3
Add helen to bioconda.
#25
xiekunwhy
closed
3 years ago
5
Fixed elapsed time display
#24
esrice
closed
4 years ago
0
some problem occurs when evaluating the data of na12878 chromosome 21
#23
huangnengCSU
closed
4 years ago
4
Models for Guppy 3.6
#22
dominik-handler
closed
3 years ago
2
Pkg
#21
kishwarshafin
closed
4 years ago
0
Master2
#20
kishwarshafin
closed
4 years ago
0
Compatibility with draft assembly from other assemblers
#19
SHuang-Broad
closed
4 years ago
3
Issue on stitch.py
#18
nozabey
closed
4 years ago
7
margin docker run fail
#17
lstxmu
closed
4 years ago
27
MarginPolish
#16
reiverjohn
closed
4 years ago
3
Plant species
#15
Jolvii85
closed
4 years ago
3
HAC models
#14
MichelMoser
closed
4 years ago
17
Fix #12
#13
cgjosephlee
closed
5 years ago
0
output path and filename are not joined properly
#12
cgjosephlee
closed
5 years ago
2
run call.consensus..py fail
#11
lstxmu
closed
5 years ago
40
h5 error
#10
MichelMoser
closed
4 years ago
21
marginPolish option
#9
MichelMoser
closed
5 years ago
3
How does marginpolish + helen compare to nanopolish?
#8
phiweger
closed
5 years ago
2
the opened github issue :fire:
#7
kishwarshafin
closed
5 years ago
0
stitch.py ValueError triggered by contig sequence name
#6
krobison13
closed
5 years ago
2
Stitch fix
#5
kishwarshafin
closed
5 years ago
0
Speedup in call_consensus.py
#4
kishwarshafin
closed
5 years ago
0
Get the master changes to production branch
#3
kishwarshafin
closed
5 years ago
0
Initial production level code merge
#2
kishwarshafin
closed
5 years ago
0
Dev v1 mp rle mt
#1
kishwarshafin
closed
5 years ago
0