Closed krs1w closed 10 months ago
Many people are facing this issue. This is a problem from the Kivy developer's end. They have changed something. I hope they fix it soon.
it is a cython version problem since a new version came out yesterday which is 3.0.0
Fixed via #844
Versions
Describe the bug My kivy-setup for building python and numpy was working a few days ago, but fails as of today. Numpy shows some deprecation warnings and ultimately fails with
'['/Users/fprefect/Developer/kivy/dist/hostpython3/bin/python', '-m', 'cython', '-3', '--fast-fail', '-o', '_philox.c', '_philox.pyx']' returned non-zero exit status 1.
I have reproduced this error with a pip installed kivy-ios and by manual checkout, on M1 Mac mini and Intel MacBook. All prior recipes in the build run work flawlessly (hostopenssl, hostpython3, libffi, openssl, python3) producing libcrypto.a, libffi.a, libpython3.a, libssl.a. The log output looks kind of cut off at the end but this is the complete output of the console. I did cut some of the numpy log naming all files extracted but if you need any more logs or infos I'm happy to provide :)To Reproduce
Expected behavior Working build, producing dist/lib/libnumpy.a
Logs
[notice] A new release of pip available: 22.3.1 -> 23.2 [notice] To update, run: pip install --upgrade pip
[INFO ] Download numpy [INFO ] Downloading https://pypi.python.org/packages/source/n/numpy/numpy-1.24.2.tar.gz [DEBUG ] New State: numpy.download at 2023-07-18 23:44:43.159955 [INFO ] Extract numpy [INFO ] Extract numpy for x86_64 [INFO ] Extract /Users/fprefect/Developer/kivy/.cache/numpy-numpy-1.24.2.tar.gz into /Users/fprefect/Developer/kivy/build/numpy/x86_64 [INFO ] Running Shell: /usr/bin/tar ('-C', '/Users/fprefect/Developer/kivy/build/numpy/x86_64', '-xv', '-z', '-f', '/Users/fprefect/Developer/kivy/.cache/numpy-numpy-1.24.2.tar.gz') {'_iter': True, '_out_bufsize': 1, '_err_to_out': True} [DEBUG ] x numpy-1.24.2/ [DEBUG ] x numpy-1.24.2/.coveragerc
[. . .]
[DEBUG ] x numpy-1.24.2/tox.ini [DEBUG ] x numpy-1.24.2/versioneer.py [DEBUG ] New State: numpy.extract at 2023-07-18 23:44:43.838770 [INFO ] Install_hostpython_prerequisites numpy [INFO ] Executing pip for hostpython with: ['install', 'Cython'] [INFO ] Running Shell: /Users/fprefect/Developer/kivy/dist/hostpython3/bin/pip3 ('install', 'Cython') {'_iter': True, '_out_bufsize': 1, '_err_to_out': True} [DEBUG ] Collecting Cython [DEBUG ] Using cached Cython-3.0.0-py2.py3-none-any.whl (1.2 MB) [DEBUG ] Installing collected packages: Cython [DEBUG ] Successfully installed Cython-3.0.0 [DEBUG ] [DEBUG ] [notice] A new release of pip available: 22.3.1 -> 23.2 [DEBUG ] [notice] To update, run: /Users/fprefect/Developer/kivy/dist/hostpython3/bin/python3.10 -m pip install --upgrade pip [DEBUG ] New State: numpy.install_hostpython_prerequisites at 2023-07-18 23:44:46.033334 [INFO ] Build_all numpy [INFO ] Build numpy for x86_64, arm64 (filtered) [INFO ] Build numpy [INFO ] Prebuild numpy for x86_64 [INFO ] Apply patch skip-math-test.patch [INFO ] Apply patch duplicated_symbols.patch [INFO ] Build numpy for x86_64 [INFO ] Running Shell: /Users/fprefect/Developer/kivy/dist/hostpython3/bin/python ('setup.py', 'build_ext', '-g') {'_env': {'CC': '/var/folders/k8/h2f5jsvx7pd6dzrjjn58ph0r0000gn/T/tmp3xscqtl5 -O3 -miphoneos-version-min=9.0 -I/Users/fprefect/Developer/kivy/dist/include/x86_64/ffi -I/Users/fprefect/Developer/kivy/dist/include/x86_64/openssl -I/Users/fprefect/Developer/kivy/dist/include/common/numpy -I/Users/fprefect/Developer/kivy/dist/include/x86_64', 'CXX': '/var/folders/k8/h2f5jsvx7pd6dzrjjn58ph0r0000gn/T/tmp629f_x6f', 'AR': '/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ar', 'LD': '/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld', 'OTHER_CFLAGS': '-I/Users/fprefect/Developer/kivy/dist/include/x86_64/ffi -I/Users/fprefect/Developer/kivy/dist/include/x86_64/openssl -I/Users/fprefect/Developer/kivy/dist/include/common/numpy -I/Users/fprefect/Developer/kivy/dist/include/x86_64', 'OTHER_LDFLAGS': '-L/Users/fprefect/Developer/kivy/dist/lib', 'CFLAGS': '-O3 -miphoneos-version-min=9.0 -I/Users/fprefect/Developer/kivy/dist/include/x86_64/ffi -I/Users/fprefect/Developer/kivy/dist/include/x86_64/openssl -I/Users/fprefect/Developer/kivy/dist/include/common/numpy -I/Users/fprefect/Developer/kivy/dist/include/x86_64', 'LDFLAGS': '-arch x86_64 -L/Users/fprefect/Developer/kivy/dist/lib -L/Applications/Xcode.app/Contents/Developer/Platforms/iPhoneSimulator.platform/Developer/SDKs/iPhoneSimulator16.4.sdk/usr/lib -miphoneos-version-min=9.0', 'KIVYIOSROOT': '/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios', 'IOSSDKROOT': '/Applications/Xcode.app/Contents/Developer/Platforms/iPhoneSimulator.platform/Developer/SDKs/iPhoneSimulator16.4.sdk', 'CUSTOMIZED_OSX_COMPILER': 'True', 'LDSHARED': '/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/tools/liblink', 'ARM_LD': '/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld', 'ARCH': 'x86_64', 'NPY_BLAS_ORDER': '', 'NPY_LAPACK_ORDER': ''}, '_iter': True, '_out_bufsize': 1, '_err_to_out': True} [DEBUG ] Running from numpy source directory. [DEBUG ] /Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py:67: DeprecationWarning: [DEBUG ] [DEBUG ]
[DEBUG ] main()
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/tools/cythonize.py", line 201, in main
[DEBUG ] find_process_files(root_dir)
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/tools/cythonize.py", line 192, in find_process_files
[DEBUG ] process(root_dir, fromfile, tofile, function, hash_db)
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/tools/cythonize.py", line 158, in process
[DEBUG ] processor_function(fromfile, tofile)
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/tools/cythonize.py", line 47, in process_pyx
[DEBUG ] subprocess.check_call(
[DEBUG ] File "/Users/fprefect/Developer/kivy/dist/hostpython3/lib/python3.10/subprocess.py", line 369, in check_call
[DEBUG ] raise CalledProcessError(retcode, cmd)
[DEBUG ] subprocess.CalledProcessError: Command '['/Users/fprefect/Developer/kivy/dist/hostpython3/bin/python', '-m', 'cython', '-3', '--fast-fail', '-o', '_philox.c', '_philox.pyx']' returned non-zero exit status 1.
[DEBUG ] Traceback (most recent call last):
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py", line 479, in
[DEBUG ] setup_package()
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py", line 458, in setup_package
[DEBUG ] generate_cython()
[DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py", line 261, in generate_cython
[DEBUG ] raise RuntimeError("Running cythonize failed!")
[DEBUG ] RuntimeError: Running cythonize failed!
Exception in thread background thread for pid 73573:
Traceback (most recent call last):
File "/Users/fprefect/.pyenv/versions/3.10.10/lib/python3.10/threading.py", line 1016, in _bootstrap_inner
self.run()
File "/Users/fprefect/.pyenv/versions/3.10.10/lib/python3.10/threading.py", line 953, in run
self._target( self._args, *self._kwargs)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 1655, in wrap
fn(rgs, **kwargs)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 2657, in background_thread
handle_exit_code(exit_code)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 2348, in fn
return self.command.handle_command_exit_code(exit_code)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 839, in handle_command_exit_code
raise exc
sh.ErrorReturnCode_1:
numpy.distutils
is deprecated since NumPy 1.23.0, as a result [DEBUG ] of the deprecation ofdistutils
itself. It will be removed for [DEBUG ] Python >= 3.12. For older Python versions it will remain present. [DEBUG ] It is recommended to usesetuptools < 60.0
for those Python versions. [DEBUG ] For more details, see: [DEBUG ] https://numpy.org/devdocs/reference/distutils_status_migration.html [DEBUG ] [DEBUG ] [DEBUG ] import numpy.distutils.command.sdist [DEBUG ] Cythonizing sources [DEBUG ] Processing numpy/random/_bounded_integers.pxd.in [DEBUG ] Processing numpy/random/_philox.pyx [DEBUG ] warning: _philox.pyx:14:0: The 'DEF' statement is deprecated and will be removed in a future Cython version. Consider using global variables, constants, and in-place literals instead. See https://github.com/cython/cython/issues/4310 [DEBUG ] [DEBUG ] Error compiling Cython file: [DEBUG ] ------------------------------------------------------------ [DEBUG ] ... [DEBUG ] self.rng_state.ctr.v[i] = counter[i] [DEBUG ] [DEBUG ] self._reset_state_variables() [DEBUG ] [DEBUG ] self._bitgen.state = <void >&self.rng_state [DEBUG ] self._bitgen.next_uint64 = &philox_uint64 [DEBUG ] ^ [DEBUG ] ------------------------------------------------------------ [DEBUG ] [DEBUG ] _philox.pyx:190:35: Cannot assign type 'uint64_t ()(void ) except? -1 nogil' to 'uint64_t ()(void ) noexcept nogil' [DEBUG ] Traceback (most recent call last): [DEBUG ] File "/Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/tools/cythonize.py", line 205, inRAN: /Users/fprefect/Developer/kivy/dist/hostpython3/bin/python setup.py build_ext -g
STDOUT: Running from numpy source directory. /Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py:67: DeprecationWarning:
numpy.distutils
is deprecated since NumPy 1.23.0, as a result of the deprecation ofdistutils
itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to usesetuptools < 60.0
for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.htmlimport numpy.distutils.command.sdist Cythonizing sources Processing numpy/random/_bounded_integers.pxd.in Processing numpy/random/_philox.pyx warning: _philox.pyx:14:0: The 'DEF' statement is deprecated and will be removed in a future Cyt... (2281 more, please see e.stdout)
STDERR:
Traceback (most recent call last): File "/Users/fprefect/Developer/kivy/venv/bin/toolchain", line 8, in
sys.exit(main())
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 1564, in main
ToolchainCL()
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 1308, in init
getattr(self, args.command)()
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 1377, in build
build_recipes(args.recipe, ctx)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 1142, in build_recipes
recipe.execute()
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 704, in execute
self.build_all()
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 74, in _cache_execution
f(self, *args, *kwargs)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 803, in build_all
self.build(arch)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 74, in _cache_execution
f(self, args, **kwargs)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 790, in build
self.build_arch(arch)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/recipes/numpy/init.py", line 36, in build_arch
super().build_arch(arch)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 1095, in build_arch
shprint(hostpython, "setup.py", "build_ext", "-g",
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/kivy_ios/toolchain.py", line 56, in shprint
for line in cmd:
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 895, in next
self.wait()
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 812, in wait
self.handle_command_exit_code(exit_code)
File "/Users/fprefect/Developer/kivy/venv/lib/python3.10/site-packages/sh.py", line 839, in handle_command_exit_code
raise exc
sh.ErrorReturnCode_1:
RAN: /Users/fprefect/Developer/kivy/dist/hostpython3/bin/python setup.py build_ext -g
STDOUT: Running from numpy source directory. /Users/fprefect/Developer/kivy/build/numpy/x86_64/numpy-1.24.2/setup.py:67: DeprecationWarning:
numpy.distutils
is deprecated since NumPy 1.23.0, as a result of the deprecation ofdistutils
itself. It will be removed for Python >= 3.12. For older Python versions it will remain present. It is recommended to usesetuptools < 60.0
for those Python versions. For more details, see: https://numpy.org/devdocs/reference/distutils_status_migration.htmlimport numpy.distutils.command.sdist Cythonizing sources Processing numpy/random/_bounded_integers.pxd.in Processing numpy/random/_philox.pyx warning: _philox.pyx:14:0: The 'DEF' statement is deprecated and will be removed in a future Cyt... (2281 more, please see e.stdout)
STDERR: