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kkang7 / CDSeq_R_Package

CDSeq R Package
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Run time of CDSeq() #20

Closed levinhein closed 1 year ago

levinhein commented 1 year ago

Hi! Thanks for developing CDSeqR. I’m just curious what is the expected run time or if you have estimated run times based on general parameters of CDSeq(). My input for bulk data is a gene (rows) x samples (columns) data. I have 48 samples and 60k genes. When I run CDSeq, I left it for 8hrs, and it was still running so I just aborted it. I wonder if that long is expected. Thank you!

levinhein commented 1 year ago

My run finished in 4 hours. Thank you.