Replace all System.out 's with logger

[kkevlar]

we must appease sonarcould

[kkevlar]

Use the following standard for Logging

private final static Logger LOGGER = Logger.getLogger(MyClass.class.getName());

public void myMethod ( )
{
        //do things
    LOGGER.log(Level.INFO, "Hi"); //equivalent to a normal System out
        //do more things
}

[bwlyday]

System.out is only used in Main and FactoryPlan. It looks like it was used to see if the function was working and not removed before commiting.

[bwlyday]

This was fixed but not closed

[kkevlar]

Uhh not quite finished yet

[JustinPrivitera]

it wasn't a smell bro