klindsay28 Newton-Krylov_OOC issues

klindsay28 / Newton-Krylov_OOC

An Out-of-Core Newton-Krylov Solver

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have hist_vars_for_precond_list return set (and rename)

#86 klindsay28 opened 11 months ago
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cleanup usage of extract_dimensions for appropriateness

#85 klindsay28 opened 1 year ago
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audit all occurances of netCDF4 Dataset to see if set_auto_mask is called or not appropriately

#84 klindsay28 opened 1 year ago
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cime_pop stats _mean_nlon and _mean_nlat_nlon output wrong if tracer module tracer_cnt>1

#83 klindsay28 closed 1 year ago
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_apply_tracers_sflux_term in cime_pop's model_state should be in tracer_module_state

#82 klindsay28 closed 1 year ago
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f-string commit 673fb4c8 broke cime_pop

#81 klindsay28 closed 1 year ago
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replace "_".join(...) with f-strings

#80 klindsay28 closed 1 year ago
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compute and apply scalef by region

#79 klindsay28 closed 1 year ago
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use f-strings in most expressions with string construction

#78 klindsay28 closed 1 year ago
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treat DeprecationWarning warnings as errors in ci scripts

#77 klindsay28 closed 1 year ago
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Reimplement regions

#76 klindsay28 closed 1 year ago
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input directory not found if nk_ooc installed with pip install .

#75 klindsay28 opened 1 year ago
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create call tree

#74 klindsay28 opened 1 year ago
1
testing updates

#73 klindsay28 closed 1 year ago
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implementation of regions has potential to use wildly excessive amount of memory

#72 klindsay28 closed 1 year ago
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add "how do I recover from error" to FAQ

#71 klindsay28 opened 2 years ago
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set_tracer_vals in model_state_base should raise an error if tracer_name is not found

#70 klindsay28 closed 1 year ago
1
migrate ci from travis-ci to github actions

#69 klindsay28 closed 2 years ago
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migrate CI from travis-ci to github actions

#68 klindsay28 closed 2 years ago
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add git hash to file metadata in created files

#67 klindsay28 opened 3 years ago
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avoid code duplication between test_problem and py_driver_2d

#66 klindsay28 opened 3 years ago
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pyferret cannot read Newton_stats.nc file

#65 klindsay28 closed 3 years ago
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scalef applied to limit Newton increment is independent of region

#64 klindsay28 closed 1 year ago
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merge py_driver_2d

#63 klindsay28 closed 3 years ago
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rename master branch

#62 klindsay28 closed 3 years ago
1
consider set_tracer_vals and set_tracer_vals_all methods return self

#61 klindsay28 opened 3 years ago
1
po4_ind in test_problem.phosphorus.write_hist_vars incorrect

#60 klindsay28 closed 3 years ago
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test_problem: depth_bounds not written to stats file

#59 klindsay28 closed 3 years ago
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standardize/unify argument descriptions in function docstrings

#58 klindsay28 opened 3 years ago
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time units in test_problem model are inconsistent

#57 klindsay28 closed 3 years ago
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some code assumes that SpatialAxis is increasing and doesn't confirm this

#56 klindsay28 opened 3 years ago
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refactor vert_mix contribution to apply_precond_jacobian in test_problem

#55 klindsay28 opened 3 years ago
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implement conservative remapping of mixing coefficient in vert_mix module

#54 klindsay28 opened 3 years ago
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inappropriate usage of NotImplementedError

#53 klindsay28 closed 3 years ago
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ability to run model_state.py standalone should be either exercised/tested or removed

#52 klindsay28 opened 3 years ago
2
some pytest tests rely on travis_short.sh generated output

#51 klindsay28 closed 3 years ago
1
model specific cfg_override_args should be in model code, not share

#50 klindsay28 closed 3 years ago
0
add stub implementations of _read_vals and dump methods in TracerModuleStateBase

#49 klindsay28 closed 3 years ago
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units for {tracername}_depth_int in test_problem not canonicalized

#48 klindsay28 closed 3 years ago
1
{ann,mon}_files_to_mean_file ignore cell_methods

#47 klindsay28 opened 4 years ago
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{ann,mon}_files_to_mean_file don't set time:bounds values appropriately

#46 klindsay28 opened 4 years ago
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abort share.logging_config if filemode="w" and logging_fname exists

#45 klindsay28 opened 4 years ago
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cime_pop: verify that rpointer_dir exists as a directory

#44 klindsay28 closed 1 year ago
2
audit list comprehensions for potential replacement by generator expression

#43 klindsay28 opened 4 years ago
0
surface fluxes depending on another tracer getting omitted in cime_pop model

#42 klindsay28 closed 4 years ago
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append_tracer_names_per_precond_matrix is not pythonic

#41 klindsay28 closed 4 years ago
1
Jacobian matrix preconditioner option in matrix `base` override options for specific matrices for options in lists

#40 klindsay28 closed 4 years ago
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check for unused cfg variables

#39 klindsay28 closed 4 years ago
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framework for external packages that peform time integration

#38 klindsay28 opened 4 years ago
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add option to omit datestring from logging output

#37 klindsay28 closed 3 years ago
1