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klmr / thesis

My PhD thesis, “Investigating the link between tRNA and mRNA abundance in mammals”
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PCA of mean GO term codon usage #2

Open kcmtest opened 3 years ago

kcmtest commented 3 years ago

How did you perform this? "PCA of mean GO term codon usage" I was reading your thesis saw in this chapter

Implications of codon–anticodon interaction on the regulation of translation

Can i use for differential analysed genes on which I ran gene ontology now I have the ontology. can you show me a dummy example how to perform this.

I have done PCA on expression and sample wise but not like this. I would like to do the same.

Any suggestion or help would be highly appreciated