kmaterna
commented
2 months ago @odito2 hello, sorry for the delay in getting back to you. My guess is that something with os.sep didn't happen correctly... the glob is returning zero files matching the pattern provided, even though you probably have Output/delanauy/delaunay_strain.nc and similar files.
I changed os.sep, and also added more print statements so we might be able to figure out why the glob is returning nothing. Would you be able to pull, install, and run it again?
Commit is here: https://github.com/kmaterna/Strain_2D/commit/ec7b8400df6a09f02fa85fcfaa3ccd67e4e42d92
Hi, Thank you again for the software! I tried to compare 3 methods as you can see (on Windows) but received an error. All three were successfully calculated alone. (The txt file name was updated with these 3 methods, therefore received th "Isr" extension.) I'll be happy if you could see why the comparrison didnt workout.
D:\Ariel\Phd\Strain_software\Strain_2D\example>python ..\Strain_Tools\bin\strain_rate_comparison.py strain_compare_config_Isr.txt
Hello! We are comparing strain calculations... Comparing strain from calculations : dict_values(['Output/delaunay', 'Output/loc_avg_grad', 'Output/geostats']) Putting the outputs : Output/_strain_comparison
Traceback (most recent call last): File "D:\Ariel\Phd\Strain_software\Strain_2D\Strain_Tools\bin\strain_rate_comparison.py", line 11, in
compare_strain_grids.drive(MyParams);
File "C:\Users\Odelya\AppData\Local\Programs\Python\Python310\lib\site-packages\strain_2d-1.1.1-py3.10.egg\strain\compare_strain_grids.py", line 14, in drive
mean_dss['max_shear'] = compare_grid_means(MyParams, "max_shear", simple_means_statistics)
File "C:\Users\Odelya\AppData\Local\Programs\Python\Python310\lib\site-packages\strain_2d-1.1.1-py3.10.egg\strain\compare_strain_grids.py", line 43, in compare_grid_means
strain_values_ds = velocity_io.read_multiple_strain_netcdfs(MyParams, plot_type);
File "C:\Users\Odelya\AppData\Local\Programs\Python\Python310\lib\site-packages\strain_2d-1.1.1-py3.10.egg\strain\velocity_io.py", line 144, in read_multiple_strain_netcdfs
specific_filename = glob.glob(value + os.sep + '*' + "_strain.nc")[0]
IndexError: list index out of range