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kmayerb / tcrdist3

flexible CDR based distance metrics
MIT License
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Keep information about TCR in the TCRdist matrix #85

Closed CharlineJnnt closed 1 year ago

CharlineJnnt commented 1 year ago

Hi,

I have only one question: is it possible to keep the information of the TCR sequences used in the calculation of the distances in the final TCRdist matrix obtained by the TCRrep function ? Maybe in the names of the columns and rows of the matrix..?

Thank you !

kmayerb commented 1 year ago

The matrix matches exactly the tr.clone_df dataframe. That is the rows of the tr.pw_beta are the rows of tr.clone_df

only numeric values can be stored in np.arrays storing TCRdistances.

On Wed, Apr 26, 2023 at 2:00 AM CharlineJnnt @.***> wrote:

Hi,

I have only one question: is it possible to keep the information of the TCR sequences used in the calculation of the distances in the final TCRdist matrix obtained by the TCRrep function ? Maybe in the names of the columns and rows of the matrix..?

Thank you !

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CharlineJnnt commented 1 year ago

Okey thank you !