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knausb / vcfR

Tools to work with variant call format files
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Addresses issue CHROM param in create.chromR #52 #164

Open RichardJActon opened 4 years ago

RichardJActon commented 4 years ago

Adds a CHROM param to create.chromR to allow the user to designate which chromosome should be subset instead of defaulting to the first.

This includes appropriate warnings about mismatched names and new test data for creating objects from sources with multiple chromosomes.

coveralls commented 4 years ago

Coverage Status

Coverage increased (+0.5%) to 68.009% when pulling af34b854a69ae58968cf7e27f9027bf25a78c068 on RichardJActon:master into 5fb215b81b5aab44796989629b27cf1c1ff3703f on knausb:master.