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knausb / vcfR

Tools to work with variant call format files
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not available for R4.0 #169

Closed complexgenome closed 3 years ago

complexgenome commented 3 years ago

install.packages("vcfR") I get error as:

Warning message:
package ‘vcfR’ is not available (for R version 4.0.0)

R4.0 debian platform.

knausb commented 3 years ago

This issue has already been reported in other issues. Please do not post redundant issues.

complexgenome commented 3 years ago

Sorry, didn't find any issue open for R4.0.

I used devtools::install_github(repo="knausb/vcfR") and installed successfully vcfR_1.12.0.tar.gz I was able to install it with no issues. :)

Found the hack on closed https://github.com/knausb/vcfR/issues/168

vcfR 1.11.0 Released on CRAN 2020-06-05 CRAN removed this library Archived on 2020-07-05 https://cran.r-project.org/web/packages/vcfR/index.html

If there's any appropriate open issue please leave link here for future users.

Cheers,

igordot commented 3 years ago

Sorry, didn't find any issue open for R4.0.

This is not specific to any version of R. It's currently not available on CRAN in general. This issue has a lot of background info and updates: https://github.com/knausb/vcfR/issues/165

knausb commented 3 years ago

Thank you @igordot ! I've been struggling with posts like this and appreciate your help! Brian