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knausb / vcfR

Tools to work with variant call format files
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Unable to convert to long-format using vcfR2tidy #186

Closed oisinmccaffrey closed 3 years ago

oisinmccaffrey commented 3 years ago

Thanks, @knausb for creating this very useful package!

Firstly, Class vcfR seems ok

Object of Class vcfR 0 samples 1 CHROMs 37 variants Object size: 0.1 Mb NaN percent missing data

Then

vcfR2tidy(METIN_1)

Error in if (colnames(x@gt)[1] != "FORMAT") { : argument is of length zero

I am using R version 4.0.5 (2021-03-31), and vcfR_1.12.0