knights-lab / SHOGUN

SHallow shOtGUN profiler
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CUDA incompatibility error #38

Open idoerg opened 4 years ago

idoerg commented 4 years ago

When trying to install I get the following error (Running on Ubuntu 18.04):

UnsatisfiableError: The following specifications were found to be incompatible with your CUDA driver:

  - feature:/linux-64::__cuda==10.2=0

Your installed CUDA driver is: 10.2

My conda environment:

(shogun) idoerg@margarita:~$ conda info

     active environment : shogun
    active env location : /home/idoerg/anaconda3/envs/shogun
            shell level : 2
       user config file : /home/idoerg/.condarc
```populated config files : 
          conda version : 4.8.3
    conda-build version : 3.18.11
         python version : 3.8.3.final.0
       virtual packages : __cuda=10.2
                          __glibc=2.27
       base environment : /home/idoerg/anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/idoerg/anaconda3/pkgs
                          /home/idoerg/.conda/pkgs
       envs directories : /home/idoerg/anaconda3/envs
                          /home/idoerg/.conda/envs
               platform : linux-64
             user-agent : conda/4.8.3 requests/2.24.0 CPython/3.8.3 Linux/4.19.2-041902-generic ubuntu/18.04.5 glibc/2.27
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False
GabeAl commented 4 years ago

Thanks for the report! @Ben: Woah, why is Conda asking for CUDA in the first place? SHOGUN doesn't use the GPU at all. I smell a conda/python/environment issue --can you confirm there's no cuda requirement in shogun's install script?

Cheerio, Gabe

On Tue, Aug 18, 2020 at 12:48 PM Iddo Friedberg notifications@github.com wrote:

When trying to install I get the following error (Running on Ubuntu 18.04):

UnsatisfiableError: The following specifications were found to be incompatible with your CUDA driver:

  • feature:/linux-64::__cuda==10.2=0

Your installed CUDA driver is: 10.2

My conda environment:

(shogun) idoerg@margarita:~$ conda info

 active environment : shogun
active env location : /home/idoerg/anaconda3/envs/shogun
        shell level : 2
   user config file : /home/idoerg/.condarc

          conda version : 4.8.3
    conda-build version : 3.18.11
         python version : 3.8.3.final.0
       virtual packages : __cuda=10.2
                          __glibc=2.27
       base environment : /home/idoerg/anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/idoerg/anaconda3/pkgs
                          /home/idoerg/.conda/pkgs
       envs directories : /home/idoerg/anaconda3/envs
                          /home/idoerg/.conda/envs
               platform : linux-64
             user-agent : conda/4.8.3 requests/2.24.0 CPython/3.8.3 Linux/4.19.2-041902-generic ubuntu/18.04.5 glibc/2.27
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False

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