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knights-lab / UTree

K-mer searching with trees
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Report Confidence is an INT #3

Closed bhillmann closed 7 years ago

bhillmann commented 7 years ago

In the TSV summaries the confidence score is being rounded to an int. See below for my results.

NZ_GG666849.1_111224_1_1_0_0_0_0:0:0_0:0:0_7/1  k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   1
NZ_GG666849.1_464593_1_0_1_0_0_0:0:0_0:0:0_8/1
NZ_GG666849.1_202902_1_1_0_0_0_0:0:0_0:0:0_9/1
NZ_GG666849.1_346751_1_0_1_0_0_0:0:0_0:0:0_a/1
NZ_GG666849.1_522249_1_1_0_0_0_0:0:0_0:0:0_b/1
NZ_GG666849.1_337059_1_0_1_0_0_0:0:0_0:0:0_c/1
NZ_GG666849.1_463877_1_1_0_0_0_0:0:0_0:0:0_d/1
NZ_GG666849.1_580077_1_1_0_0_0_0:0:0_0:0:0_e/1
NZ_GG666849.1_176856_1_0_1_0_0_0:0:0_0:0:0_f/1  k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   0
NZ_GG666849.1_260677_1_1_0_0_0_0:0:0_0:0:0_10/1
NZ_GG666849.1_99138_1_0_1_0_0_0:0:0_0:0:0_11/1
NZ_GG666849.1_2950_1_1_0_0_0_0:0:0_0:0:0_12/1
NZ_GG666849.1_547218_1_0_1_0_0_0:0:0_0:0:0_13/1
NZ_GG666849.1_27044_1_1_0_0_0_0:0:0_0:0:0_14/1
NZ_GG666849.1_183407_1_1_0_0_0_0:0:0_0:0:0_15/1
NZ_GG666849.1_257345_1_0_1_0_0_0:0:0_0:0:0_16/1 k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   1
NZ_GG666849.1_274553_1_1_0_0_0_0:0:0_0:0:0_17/1
NZ_GG666849.1_188311_1_1_0_0_0_0:0:0_0:0:0_18/1
NZ_GG666849.1_174170_1_0_1_0_0_0:0:0_0:0:0_19/1 k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   0
NZ_GG666849.1_609478_1_1_0_0_0_0:0:0_0:0:0_1a/1
NZ_GG666849.1_612224_1_0_1_0_0_0:0:0_0:0:0_1b/1
NZ_GG666849.1_596684_1_0_1_0_0_0:0:0_0:0:0_1c/1
NZ_GG666849.1_417172_1_0_1_0_0_0:0:0_0:0:0_1d/1
NZ_GG666849.1_91934_1_1_0_0_0_0:0:0_0:0:0_1e/1
NZ_GG666849.1_401683_1_1_0_0_0_0:0:0_0:0:0_1f/1
NZ_GG666849.1_573831_1_1_0_0_0_0:0:0_0:0:0_20/1
NZ_GG666849.1_117344_1_0_1_0_0_0:0:0_0:0:0_21/1
NZ_GG666849.1_360876_1_1_0_0_0_0:0:0_0:0:0_22/1
NZ_GG666849.1_603070_1_1_0_0_0_0:0:0_0:0:0_23/1
NZ_GG666849.1_282079_1_0_1_0_0_0:0:0_0:0:0_24/1
NZ_GG666849.1_402838_1_0_1_0_0_0:0:0_0:0:0_25/1
NZ_GG666849.1_567590_1_0_1_0_0_0:0:0_0:0:0_26/1
NZ_GG666849.1_35771_1_0_1_0_0_0:0:0_0:0:0_27/1
NZ_GG666849.1_324597_1_0_1_0_0_0:0:0_0:0:0_28/1
NZ_GG666849.1_74808_1_0_1_0_0_0:0:0_0:0:0_29/1  k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   0
NZ_GG666849.1_132672_1_1_0_0_0_0:0:0_0:0:0_2a/1
NZ_GG666849.1_70291_1_0_1_0_0_0:0:0_0:0:0_2b/1
NZ_GG666849.1_542328_1_1_0_0_0_0:0:0_0:0:0_2c/1
NZ_GG666849.1_398622_1_1_0_0_0_0:0:0_0:0:0_2d/1 k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium_longum   0